Origin of rice (Oryza sativa L.) domestication genes

Correlation Studies in Rice (Oryza sativa L.)

Seventy genotypes of rice (Oryza sativa L.) were evaluated during Kharif 2012 to study the nature and extent of correlation among yield and yield attributing characters, days to 50 per cent flowering, days to maturity, number of effective tillers per plant, plant height, panicle length, number of grains per panicle, 1000-grain weight, grain yield per plant, kernel length, kernel breadth and L/B...

Multiple Origin but Single Domestication Led to Oryza sativa

The domestication scenario that led to Asian rice (Oryza sativa) is a contentious topic. Here, we have reanalyzed a previously published large-scale wild and domesticated rice data set, which was also analyzed by two studies but resulted in two contrasting domestication models. We suggest that the analysis of false-positive selective sweep regions and phylogenetic analysis of concatenated genom...

Genetic variation in the chloroplast genome suggests multiple domestication of cultivated Asian rice (Oryza sativa L.).

Two hundred and seventy-five accessions of cultivated Asian rice and 44 accessions of AA genome Oryza species were classified into 8 chloroplast (cp) genome types (A-H) based on insertion-deletion events at 3 regions (8K, 57K, and 76K) of the cp genome. The ancestral cp genome type was determined according to the frequency of occurrence in Oryza species and the likely evolution of the variable ...

The extent of linkage disequilibrium in rice (Oryza sativa L.).

Despite its status as one of the world's major crops, linkage disequilibrium (LD) patterns have not been systematically characterized across the genome of Asian rice (Oryza sativa). Such information is critical to fully exploit the genome sequence for mapping complex traits using association techniques. Here we characterize LD in five 500-kb regions of the rice genome in three major cultivated ...

Straighthead Disease of Rice (Oryza sativa L.) Induced by Arsenic